Zachary Sailer
Zachary Sailer
DendroPy is awesome. I would love to see DendroPy's Tree data structures access modern tree visualization tools like [D3](https://d3js.org/). A simple method for writing the Tree data structure to a...
Hello everyone, I wanted to point you to my discourse post, ["Reviving the all-Jupyter team meeting"](https://discourse.jupyter.org/t/reviving-the-all-jupyter-team-meetings/423). A few of us met on Zoom earlier today and discussed how to repurpose...
Implements #763 This is an early draft of the work. I wanted to open-source this early to encourage feedback/discussion. Adds a state machine to the default `KernelManager` implementation . This...
Replaces [`jupyter_telemetry`](https://github.com/jupyter/telemetry) with [`jupyter_events`](https://github.com/jupyter/jupyter_events). Telemetry is a more specific use case of the Jupyter Event System mentioned in #780, and it brings some extra constraints that won't be addressed by...
Jupyter Server's unit tests involving pending kernels are failing on Windows in CI—I haven't tested locally. It might take me some time to fix the issue, especially since I don't...
CI in #820 is failing at the `test_help_output` step, caused (I believe) https://github.com/ipython/traitlets/pull/698. We may need to temporarily pin traitlets to
Target date for final release: start of SciPy Conference. - [x] Create 1.x branch in server. - [x] Update branch references in 1.x branch from main to 1.x. - [x]...
Running list of notebook PRs that we'll port in real-time to keep things in sync. - [x] jupyter/notebook#4180 - [x] jupyter/notebook#4260 - [x] jupyter/notebook#4670 - [x] jupyter/notebook#4795 - [x] jupyter/notebook#4891...
Adds a `.phylo.prune()` method. The function takes a simple kwarg. The key is the column name in the DataFrame and the value is row's value at that column. ## Example:...
@harmsm and @jharman25 will be interested. Here's a method that enables you to access sequence data from a phylopandas dataframe as its own sub-dataframe. You can visualize, slice, and analyze...