dolphinnext

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Documentation about dolphinnext

1

Hello I was wondering if there is a documentation about developping and working on dolphinnext. The structure of the project, what is where, how to do certain things, add functionalities,...

MatheoDumont

Tutorial issues

4

**Describe the bug** Using the instructions at https://github.com/UMMS-Biocore/dolphinnext-tutorial I find myself hitting an issue at the https://github.com/UMMS-Biocore/dolphinnext-tutorial#creating-collection I cant seem to add the files from `/data/fastq_data/single` and get the following:...

tomgreen66

dolphinnext not compatible with fish

2

**Bug description** Dolphinnext cannot validate ssh connection and submit jobs if the user's shell is fish and not bash. **To Reproduce** 1. Connect to your HPC (remote) 2. change your...

sguizard

Queue system for multiple run submission

2

Add optional concurrent job limit in the profile settings. Also allow setting job priority in the advanced settings of the run.

onuryukselen

Add markdown section to reports

2

Add markdown box to reports tab for each run.

onuryukselen

User Groups

1

Users should be added to the groups by searching their names

nephantes

add remove user button in order to remove members from the groups

1

add "remove member" button in the profile -> group section

onuryukselen

error reporting

1

Remove the keyword "error" from run status checking criteria. Use more specific terms.

onuryukselen

Creating new group and adding users

2

For users: In order to add users, ask for email address. For admin: Make it table with checkboxes which allows multiple selection.

onuryukselen

Max_file_size limit for upload is defined in the public/js/runpipeline.js file. Make this parameter adjustable by .sec file.

onuryukselen