python-neo

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https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/src/master/neuroscope/dataset_1

bendichter

Blackrock nsx files to edf/mne

3

Hi, I'm trying to convert my blackrock recordings into edf to mne files using python. I tried to run some examples I found using BlackrockIO: https://mne.tools/stable/auto_examples/io/read_neo_format.html https://tinmard.github.io/file-conversion.html https://github.com/tinmarD/utils_python/blob/master/utils_eeg_io.py But I...

Falach

Spike data support for OpenEphysBinaryRawIO

5

Hey, I was looking for a neo IO class which supports a) lazy loading / memory efficient loading, and b) reading AND writing neo blocks. The openephysbinaryrawio class comes close,...

shashwatsridhar

Adding HEKA loading module

7

We have recently released a python module for loading HEKA filetypes (https://github.com/easy-electrophysiology/load-heka-python). Currently HEKA loading is available in Neo through the Stimfit module, though a couple of benefits of this...

easy-electrophysiology

446 tests fail with neo-0.10.0

4

This is the full build and test log: https://ppb.chymera.eu/f0c5ba.log I assume some failures at least are due to network access (is there any way to easily skip tests which require...

TheChymera

Many formats require only minimal information about header length, data format and channels to be readable. The binary interface is extracting these from a json sidecar file and allows to...

JuliaSprenger

index error with a spikeglx neuropixels files

4

When I try to open a set of imec.ap.bin/imec.ap.meta files I get this error (when I pass the folder in which only these two files are present): ``` >>> from...

Saksham20

It's still referenced here: https://github.com/NeuralEnsemble/python-neo/blob/bc6037048fc8d15919d51f2c67a4ab75df40dacc/doc/source/images/generate_diagram.py#L16

sanjayankur31

Duration of time slices of an AnalogSignal differs when using or not lazy loading

2

Hi All, I am using `cut_segment_by_epoch` to extract trials from a Blackrock Microsystems dataset (`i140703-001.ns6` and `i140703-001.nev` publicly available [here](https://doi.gin.g-node.org/10.12751/g-node.f83565/)). When cutting a fixed duration after the times defined in...

kohlerca

Improvements to do for NWBIO

1

This issue gives a list of all the improvements to be made for the NWBIO class. - [ ] Have a mechanism which writes an AnalogSignal in a chunk mode...

legouee