python-neo

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Spike2IO. AssertionError: Signal channel have differents pause so diffrents nb_segment

12

Good morning, I am trying to read some .smr files from Spike2. It is working for some of the files (that I got from someone else) but it is not...

LudovicGardy

* multi dim ? * complex dtype ?

samuelgarcia

cf #837

apdavison

Handling of `None `as default file location argument

1

When a keyword argument is by default `None`, e.g. for filenames in IOs, then there are multiple options on how to deal with this default value later on. Two common...

JuliaSprenger

SpikeGLX improvement

3

#896 have implemented spikeglx reader But SpikeGLXRawIO still need improvement that should be done in conjonction with spikeglx team: * better t_start handling * fine alignement between stream * ensure...

samuelgarcia

Association of spiketrains & analogsignals

6

With the current neo structure, groups can be used to link to `spiketrain`s and `analogsignals`, e.g. to associate data coming from the same recording electrode. However, this association is only...

JuliaSprenger

Remove neo.io.nix_fr.NixIO and neo.rawio.NixRawIO

2

NixIo have 2 implementations: * one non rescritive but without lazy, the "legacy one" : neo.io.nixio.NixIO * one rescritive, based on rawio but with lazy capability, the "rawio one" :...

samuelgarcia

For file formats that contain information about the relationship between groups representing units this should be reflected in the neo file structure generated when reading the datablock. See also discussion...

JuliaSprenger

Originating in #893 it would be good to run the tests on CircleCi with `h5py >=3.0` and `h5py

JuliaSprenger

Missing 'array_annotate' method for ProxyDataObjects

2

ProxyAnalogSignal objects provide an `annotate` method, but no corresponding `array_annotate` method. We should add this to make ProxyAnalogSignal objects as similar to AnalogSignal objects as possible.

JuliaSprenger