python-neo

python-neo copied to clipboard

Invalid annotation error when trying to read .nwb file

3

Greetings everyone! I hope someone here can help with solving a very basic issue. Currently I am trying to read a .nwb file using NWBIO like this: from pynwb import...

Idavr

Check codebase for appropriate use of exceptions

2

apdavison

Issue with reading .pl2 files

9

**Describe the bug** I encountered an issue while attempting to read a .pl2 file using the Plexon2RawIO from the neo library. Here's the snippet I used: `import neo.rawio` `from pathlib...

Bosswang12138

"ValueError: time data 'File was' does not match format '%Y/%m/%d %H:%M:%S'"

1

Hi all, Starting a project where I need to analyze Neuralynx files. When I tried to use the NeuralynxIO module and load in my data, I'm getting the following error:...

eduardosand

Direct assignment of multiple '.ncs' files in neo.io.NeuralynxIO(dirname=session_data)

3

**Is your feature request related to a problem? Please describe.** I have Neuralynx data with micro (32k sampling rate) and macro (2k sampling rate) in the same folder. Current `NeuralynxIO`...

NxNiki

Read. plx file, error occurs when the file is larger than 2GB

2

**Describe the bug** When reading. plx files, an error occurs when the file is larger than 2GB, and when the file is smaller than 1GB, it can be read and...

didi226

CI is failing on non-ubuntu systems

3

With the latest CI feature that permits to trigger the IO test on different OS, the tests are still failing for [macos](https://github.com/NeuralEnsemble/python-neo/actions/runs/5398841450/jobs/9805180705). The corresponding run on windows is [here](https://github.com/NeuralEnsemble/python-neo/actions/runs/5402982864/jobs/9815102665) This...

JuliaSprenger

by - importing the rawio __doc__ into the io - each (raw)io should have an `examples` attribute providing the (raw)io specific example code - this code will be appended to...

JuliaSprenger

Loading Axion Biosystems AXIS data

6

Hi! Does spikeinterface support loading .raw or .spk formats of AXIS data? I don't see it in the docs, so I guess this format is not implemented. Thanks!

alexmascension

Neuralynx reading error: Incompatible section structures across streams

1

Hello all, I'm reading in a few neuralynx datasets, and something I've been coming across is a value error when parsing the header. At first I thought it had to...

eduardosand