python-neo

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If a `container.filter` only returns `SpikeTrain` objects, they are returned as a `SpikeTrainList`. https://github.com/NeuralEnsemble/python-neo/blob/345d3392ee443994b8de58731cc9459e5308ff11/neo/core/container.py#L89-L90 The initialisation of this list overwrites the original parent links, causing the following behaviour: ``` import...

Kleinjohann

Extract events from spike glx

5

Trying to fix [this](https://github.com/NeuralEnsemble/python-neo/issues/1365?notification_referrer_id=NT_kwDOAHcV2LI4ODAzMzY1MTk4Ojc4MDQzNzY#issuecomment-1910319253)

manimoh

NeuralynxIO: support List[str] for filename parameter

26

Add a feature to allow multiple files as filename. Now user can create a list of filenames and assign it to the argument `filename` of `neo.io.NeuralynxIO(filename=session_data)` to read the specific...

NxNiki

SpikeGLX: add Ultra and NP-Opto types

2

Fixes #1451 also adding Ultra-beta variant (1121) ant NP-Opto (1300). All these models are based on NP1.0 technology @CodyCBakerPhD

alejoe91

Convert Asserts to Errors

7

Fixes #847 As part of the push to 1.0.0 we really should move `assert` to an appropriate error. I'm going to try to start moving some files over to errors....

zm711

This will be adding support for `RHX` rhs files with a separate header for `rhs` files. We haven't officially update RHS support since RHS 1.0 and we are on 3.x...

zm711

Make IO constructor signature consistent

2

**Is your feature request related to a problem? Please describe.** Some IOs expect a single file name, others expect a single directory name, others expect a file basename, which is...

apdavison

Can't find the marker channels in a .smrx file using the CedIO loader.

9

As the title suggests. I have recording data in from of .smrx files. Using a keyboard input, I trigger waveforms, which i feed back as ADC. I can find the...

FloHofmann

TiffIO: Allow bottom left origin for images

2

Fixes #876. I added in a note (in the docstring) explaining that upper left is the python default (from PIL and pillow). As a default I left the upper left,...

zm711

Inconsistent `rescale_spike_timestamp` behavior for spikes in Plexon?

3

In the base class the docstring of the `rescale_spike_timestamp` function claims that it should rescale timestamps to seconds: https://github.com/NeuralEnsemble/python-neo/blob/4d4eb85e459c7e35cc1d43ce423fd58907fb3002/neo/rawio/baserawio.py#L646-L650 However, looking at Plexon it seems that the private method is...

h-mayorquin