Jacques Dainat
Sure but you must make a proper release (https://github.com/zhangrengang/TEsorter/releases) with description of lastest modifications. Oh actually I see that the version 1.4 didn't went well into bioconda (https://github.com/bioconda/bioconda-recipes/pull/33660) I must...
Same issue here R 4.1.1 classifierplots 1.4.0
Hi, I think I set All scripts using codontable with value 1 by default. The table 0 is specific to bioperl, but was even bugged (unusable) in many version of...
Yes sure improving the doc is always a good idea ^^. We could provide a link to the NCBI codon tables, explain what is the table 0, etc. Go ahead...
You must update the bioperl version to the most recent one, this is the only way to be able to use table 0. (or maybe use an very old version?)....
What AGAT version do you use?
I will investigate this
Right there is still a bug in my code. I will push a fix. If you want to fix it yourself replace the `get_proper_codon_table` function in lib/AGAT/Utilities.pm by ``` sub...
Could you provide an example of how you would like the command line to look like?
I do not get what you mean by " I could only filter one gene at a time" agat_sp_filter_feature_by_attribute_value.pl can filter all the genes in accordance with the value constraint...