Jacques Dainat
Jacques Dainat
Interesting, thank you for the feedbacks
If I find time I will try to add it.
`prepare_gffout` is a function coming with AGAT. If it cannot access it, it means the installation didn't went as expected (The lib does not live where it is expected and...
Thank you @kbipinkumar for your help. The problem occurs since perl version 5.36 see #392 Script in `.pl` in `/usr/bin/vendor_perl` seems to not be able to access the libraries `.pm`...
Dear perl Master @viklund, Would you have some insight to help? Are you aware of any update since perl version 5.36 that may have mess up installation procedure? i.e. expected...
Sure I will have a look at it
Everything sounds fine excepted I need to point the recipe to the proper EDTA2 release that contain the mentioned updates which does not exist yet. Could you update or create...
You must use the qualifier `ribosomal_slippage` in the `CDS` feature: https://www.ebi.ac.uk/ena/WebFeat/ So it will be a `ribosomal_slippage` attribute of the `CDS` feature in the GFF. But I think the mechanism...
Thank you for your feedback. What was your previous biopython version?
This behavior is related to biopython. Could you tell what version of biopython you use? see https://github.com/NBISweden/EMBLmyGFF3/issues/70