Jacques Dainat
I would like to develop this but do not have time. Maybe if you could already work on listing all types of hints used by Augustus and what they represent...
I had work on that a while ago, I forgot to push this work in progress. You can find it in the `Augustus` branch. The script is called `agat_sp_create_augustus_hints.pl`. Start...
@vivekbhr waiting this feature request to be addressed you can use `agat_sp_extract_sequences.pl` from [AGAT](https://github.com/NBISweden/AGAT/) running: ``` agat_sp_extract_sequences.pl --gff inputgff --fasta input.fa --up --down ``` P.S: AGAT and gffread are complementary
> @Juke34 Hi Juke, I also met the CircleCI issue. Do you have some idea how to resolve it? Thank you! #45374 Sorry no idea
I hop this time it will be fine 🤞
Sorry I. made a mistake when pinning blast
should be better now
We get this error: `PermissionError: [Errno 13] Permission denied: 'gdb'` during the tests any idea what it could be and how to fix it? @oushujun ?
There is a `No space left on device` also. I see that the Dfam DB is downloaded ` wget -O Dfam_curatedonly.h5.gz https://www.dfam.org/releases/Dfam_3.7/families/Dfam_curatedonly.h5.gz` how big is the DB once unzipped? How...