Augustus
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Gaius-Augustus
Genome annotation with AUGUSTUS
../include/types.hh:16:43: fatal error: boost/archive/text_oarchive.hpp: No such file or directory Can you help me to solve this problem?
Added catching an exception for the error "An out_of_range exception occurred: vector::_M_range_check: __n (which is 12157) >= this->size() (which is 3)" possibly caused by an error in .nwk file
Hi, I'm trying to compile the new augustus version 3.5.0. this is the error the make output: ``` mkdir -p bin cd src && make make[1]: Entering directory `/user/work/tk19812/software/Augustus-3.5.0/src' g++...
A user reported by email: Hello, I have an error when I use Augustus, I run the code as: augustus --species=verticillium_albo_atrum1 --AUGUSTUS_CONFIG_PATH=/public/home/software/opt/bio/software/augustus/3.3.3/config/ --uniqueGeneId=true ../../repeat2/V991.rawchrom.FINAL.fasta.masked >V991-rep2.gff But the V991-rep2.gff file generated...
Hi, Why extrinsic.M.RM.E.W.cfg has one more column before extrinsic columns, and what column 2-4 means? Why other extrinsic.cfg files have one column less than extrinsic.M.RM.E.W.cfg before extrinsic columns?  Also...
Hello, This is not an issue but rather a question. I have been looking though the documentation to see if it is possible to make Augustus enforce a maximum intron...
Hi, As recommanded by mehlan, I open an issue related to filterbam script use. I have aligned the RNA-seq paired reads using tophat following this command: ```bash # Running TopHat:...
check whether this has to do with a its different genetic code.
I have used WebAUGUSTUS to generate AUGUSTUS species-specific parameters for a parasitic nematode genome with high accuracy (1e-04 error rate) and contiguity (chromosomal single scaffolds). Two other genomes of this...
One of the issues I may be facing in running AUGUSTUS on a new genome is the possibility that it has substantial variations in GC% content in different parts of...