Clare Pilgrim

> x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. I...

Yeah, I wonder if 'existence overlaps' should be broadened to include the case where the entity starts before and finishes after the process - I think this might be what...

Thinking about it, there are a few ways we might want to represent these phenotypes: 1. phenotype is present for at least part of the process (starts during or before...

We currently don't have/want this for any other behaviors than sleep in dpo right now, but I think this could potentially be used for many other behaviors, such as feeding,...

@RoseOughtred DPO is a small ontology of ~200 terms and we do not currently have the resources to add all of the terms you request, especially as they are not...

A couple of small consistency points for the description - consider having all of these in present tense (most seem to be already) and 'behaviour' -> 'behavior'

In the text definition

Similar thing for decreased rate being described as 'impaired'

There is also this proposed change to PATO that came out of the POTATO workshop: https://github.com/pato-ontology/pato/pull/228/files This splits rate into rate of occurrence and rate of continuous process. We probably...

Not that much to add (Chris was pretty thorough): Missing: - abscessInLocation subClassOf abnormalAnatomicalEntity abnormalCellularComponent subClassOf abnormalAnatomicalEntity (and similar for subclasses) - abnormalAbsenceOfMolecularFunction subClassOf abnormalMolecularFunction - abnormalNumberOfAnatomicalEntity -> uses 'increased...