obophenotype
review: absenceOfBehavior
pattern_name: absenceOfBehavior pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/absenceOfBehavior.yaml description: "A behaviour that normally would occur did not occur."
classes: absent: PATO:0000462 abnormal: PATO:0000460 behavior process: NBO:0000313
relations: inheres_in: RO:0000052 has_modifier: RO:0002573 has_part: BFO:0000051
annotationProperties: exact_synonym: oio:hasExactSynonym
vars: behavior_process: "'behavior process'"
name: text: "absent %s" vars:
- behavior_process
def: text: "Absence of %s." vars: - behavior_process
equivalentTo: text: "'has_part' some ('absent' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))" vars: - behavior_process
@obophenotype/phenotype-editors could you all review this pattern above and sign off on it in the spreadsheet. Nico hopes to have these all reviewed by mid-March, in time for the workshop at Biocuration2019.
Poking around the MP I find some exceptions to this pattern: 'unresponsive to X stimuli' (MP:0001491, MP:0013922) 'anhedonia' (MP:0009710) These terms when they have definitions use the EQ pattern above but deviate in terms of the name and definitions.
A couple of small consistency points for the description - consider having all of these in present tense (most seem to be already) and 'behaviour' -> 'behavior'
