TCGAbiolinksGUI

TCGAbiolinksGUI copied to clipboard

When I choose "Download & Prepare" to get GDC data, TCGAbiolinksGUI stop at "prepare progress" section without any further info. (like error reports or something).

chunjiezhixin

Save New SummeriedExperiment the r didn't respond at all

2

After I uploaded the new sample matrix and clicked the Save New SummeriedExperiment the r didn't respond at all.

StarXian

I am trying to run the docker image on kitematic, but every time the gui pops up, it immediately disconnects and says "Disconnected from the server"

maxxu05

Error in manage SummarizedExperiment-can't upload new sample matrix

1

Hello I'm use R 3.5.1. I got the GDC data-molecular data-hamornized database(hg38)-Project KIRC-Transcriptome Profiling-Gene Expression Quanlification-HTSeq FPKM UQ-Primary solid tumor and download summaried experiment.But when I selected the SummerizedExperiemt,the sample...

silverlee3000

'names' attribute [7] must be the same length as the vector [5]

1

What.s this means? Warning: Error in

StarXian

TCGAbiolinksGUI() crashes on web browser

2

I used following commands on R Version 1.1.442 . `library(TCGAbiolinksGUI)` `TCGAbiolinksGUI()` It opens a web browser with address as below http://127.0.0.1:5209/ and then crashes. How to find solution ?

ghost

Hi, I am here to look for your help again.. 👍 i am trying to get the date for starburst plot, but i could not fine the CIMP option as...

yinlisssss

tar: Unrecognized archive format tar: Error exit delayed from previous errors. help me!!!

1

hi when I down the gene expression or DNA methlathion files, the R shows tar: Unrecognized archive format tar: Error exit delayed from previous errors. How can I fix IT

Yangyuan1988

Error in manage SummarizedExperiment

2

Hi, I can not use Updata sample matrix successfully, the error "Warning: Error in : unable to find an inherited method for function 'colData' for signature '"tbl_df"'" appeared when download...

DouDou-Echo

Cannot select IDAT folder

2

Hi, I cannot select an IDAT folder (see attached image); it's just blank and no options to choose from. Same thing with "set working directory" under configuration. "Select file to...

askw23