tcga-data topic

List tcga-data repositories

CLAM

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Open source tools for computational pathology - Nature BME

tcga_segmentation

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Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

TCGAmutations

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R data package for pre-compiled somatic mutations from TCGA cohorts (from Broad Firehose and TCGA MC3 Project)

oncoEnrichR

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Explore the cancer relevance of your gene list

TCGAbiolinksGUI

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TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/

Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data

MultiAssayWorkshop

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Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment

Texomer

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Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data