Yasset Perez-Riverol

Results 53 issues of Yasset Perez-Riverol

the tag should have copy option close to it.

Would be nice to have a Vis component for imported workflows like this but native in Vue. https://view.commonwl.org/workflows/github.com/uc-cdis/genomel_pipelines/blob/dev/cloud_support/support/gen3_test.pack.cwl%23subworkflow_test.cwl

enhancement

The resources option menu is not working.

enhancement

Would be great to have an spin to load the numbers in the banner home page.

enhancement

The multi-tool-containers should be integrated into the new web. https://github.com/BioContainers/multi-package-containers. This app allows users to create multi-tool containers and request to biocontainers for those containers using PR. The new web...

The following web http://biocontainers.pro/#/multipackage should be able to create a PR in BioContainers when a new mulled container has been added.

@timo @junianus : Would be nice after the Id step we have a report of totals by condition and raw files: Something like: | raw file | # psms |...

enhancement
high-priority

@jpfeuffer sometimes the pipeline fails in the id part because of the peak-peaking step by the ThermoRawFileParser. Would be great to "restart" the pipeline, same parameters but with the openms...

enhancement

Comet has done a major release including changes to the comet params. We included an issue in quantms about the topic https://github.com/bigbio/quantms/issues/371

In the following issue #671 we discussed the major changes for SDRF specification during the next release 1.1. One of them, is the extension of SDRF for metabolomics. > **GOAL**:...

Specification
sdrf-metabolomics