Yasset Perez-Riverol
Yasset Perez-Riverol
@bgruening I have spoked with @vdemichev and he is willing to help on this issue. @vdemichev Can you let us know the dependencies of DIA-NN to be able to create...
@vdemichev can we have in the releases as part of the files the .exe that can be use in Linux, not the installation Setup. conda do not allow me to...
You mean if in Linux we do `./DIA-NN.1_8.Setup.exe` will only un-compress the exe in the path? https://github.com/vdemichev/DiaNN/releases/download/1.8/DIA-NN.1_8.Setup.exe
Automatically is not possible with bioconda @bgruening. ?
We have manage to produce a `docker` and `singularity` containers. As @bgruening mentioned if the tool cannot be compiled by bioconda team will be only available in a few architectures....
@vdemichev Some background about this issue. In order to generate the mzTab from DIA-NN output we will need to add the tool and some scores, and statistical metrics to an...
@WangHong007 you can use: > Hi both, > > Run specific: 'main PSM score' - ` PSM-level q-value https://www.ebi.ac.uk/ols/ontologies/ms/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMS_1002354&viewMode=All&siblings=false` Q.Value main score at the peptide level - does not exist,...
As you said @WangHong007 we have added DIA-NN to OLS, here the term: ``` [Term] id: MS:1003253 name: DIA-NN def: "A universal software for data-independent acquisition (DIA) proteomics data processing"...
that would be great, we can generate that running time. Some of our users likes to see the relation for some terms. We can always forward them to the picture...