Pierre Yger

The error means that the file is not copied in memory. Strange. Can you run with the option si.run_sorter("spykingcircus2", ..., cache_preprocessing={"mode": "no-cache"}, ...) to see if the code is running?...

From your error message, it looks like you are not using the latest version of SC2 and of spikeinterface. Could you try to update from git (maybe with pypi it...

I would suspect such an error is due to memory issue, but not entirely sure. What is the amount of RAM you are using? Please note that while spyking-circus will...

Perfect, fine by me. But then, assuming you have too many spikes to be in memory, how do you see the rest of the algorithm? Can we still load them...

Just jumping in the discussion, would you mind sharing a small recording with me? I'm not sure to understand from the raster plots what do you miss exactly, every 50s...

Since I've developed circus2, if there is a parameter to optimize I can tell you, but I need to understand first the issue

I'm downloading the data and will have a look. But just to be clear: you are analyzing the exact same data at the spiking/electrode level? i.e including whitening, CAR removal...

There are some issues in your script, that could be simplified. I guess it used to be also valid for circus1, but with circus2 things are simpler. The raster I...

I don't know which version of spikeinterface you are using, but lots of improvements have been made to circus2 in the main branch. Since it is unlikely that you can...

This is not an issue. SC2 is handling the probe properly despite this warning that can sometimes appears. It is due to the creation of an internal recording (without probes)...