Pierre Yger

Just to comment, please note that SpykingCircus2 and tridesclous2 are still under development. They are mostly proof of concepts for now that si_based sorters are working, but we need to...

Maybe this is related to what has also been observed when data are sorted with SpyKING CIRCUS #1014?

Sorry for the fact that the beginning of the branch is messy, only the last commits are relevant. I moved everything for sparse matrices into a distinct sparse.py file, and...

Ok, I did as you suggested, and now this should be safe and clean for merge

I did changes, as suggested. Hope this is now better

What can I do more, such that this is merged in the main branch? Please let me know, I may try to add some more functions after, always with tests...

Please upgrade SC (1.0.6), since there might be bug fixes in between. >> conda upgrade -c spyking-circus spyking-circus Then let me know if you still have the issue

From the log, it seems the data are not properly loaded. Could it be possible? What do you see when launching the preview GUI >> spyking-circus mydata.dat -p

you can >> spyking-circus mydata.dat -p -s 100 (to view between 100 and 101s) But it looks normal.. Can you send me the .log file, after the clustering?

What will also be good to share, in order to debug/understand what is happening, is to set make_plots = png in the [clustering] section. And send me the zipped plot...