xiucz
xiucz
@reece Thank you, if you know more, can you tell me how to get the `r.` from the `g.` and transcript info ? Thank you.
@ndaniel I also got confused: ``` $ grep IGH final-list_candidate-fusion-genes.txt |grep NSD2 IGH@ NSD2 known,oncogene,chimerdb2,cancer,tumor,m4,mitelman 0 7 4 112 BOWTIE+SPOTLIGHT 14:106543230:+4:106530738:+ ENSG09000000017 ENSG00000109685 TTTCTGTGTCTGACTCATTTCACTCAACATAGTGGTGTCCCATTCCATCCATGTTGCTTTAA*AGTTGCTTGATTTTAGTGGCTCAGAACTGCAATTTAATTCTTGTTCTTTGCACCTCTCTCTCCACCCCTTCTTTAACTTTTTGTTAGGGATTCACTCATGTTTCGTGTGTAA ---/intergenic IGH@ NSD2 known,oncogene,chimerdb2,cancer,tumor,m4,mitelman 0 7...
> #使用说明：1.将此文件放在程序根目录中即可生效，不用做其他设置（需要重新运行程序）。 这里的重新运行 是怎么运行呢？ 谢谢。
``` $ cp socket.py /etc/init.d/ $ /etc/init.d/shadowsocks stop $ /etc/init.d/shadowsocks start ``` 同时, ``` $ cat /etc/shadowsocks.json { "server":"0.0.0.0", "server_port":mememe, "local_address":"mememe", "local_port":mememe, "password":"mememe", "port_password":{ "7878":"pwd7878", "1356":"pwd1356", "6754":"pwd6754" }, "timeout":300, "method":"aes-256-cfb",...
@ndaniel Can you take a look at this question? I am also curious about it. Thank you! Best, xiucz
@brentp Thanks for your quick reply, what does the ` the end is close enough` mean? And one more question, the three tags, DHFC, DHFFC, DHBFC, which one refers to...
SV type BND has the same start and end position, however, the type is not.
@lgmgeo Thank you very much. And in version 3.1, the option should be `-includeCI 0`, if set to `-includeCI no` or `-includeCI=no`, it will report an error. And I will...
Hi, @lgmgeo I am still a little confused about the breakpoint here, the geneA start chr1:59536384 was changed to chr1:59536375 with `-includeCI 0 `, can you check it? Thank you....
The web server's result is correct, maybe I got the file with the `-includeCI 1` option. And the job ID "RtHeS6dXoF" is here. Thank you.