sequenceserver
sequenceserver copied to clipboard
wurmlab
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
https://github.com/wurmlab/sequenceserver/blob/d56572e2902cc96354ac7ce12fb6cb4e2930ca70/lib/sequenceserver/blast/constants.rb#L32
So I am using ncbi-blast-dbs (thanks btw, it's awesome!) to fetch databases. Worked fine for the smaller ones. Added nr and nt to the mix and had some starts and...
Instead, we want - for command-line stuff: Community support forum https://support.sequenceserver.com or github.com/wurmlab/sequenceserver - for within web app, likely - https://sequenceserver.com/support/
I've been trying to blast a gene in diferent sugarcane genomes but It's not working. I have this error every time. BLAST Database error: Error pre-fetching sequence data. The problem...
THis has come up several times. > In the online BLAST from NCBI, there is the ability to exclude synthetics, uncultured organisms, or a specific species. Is there a similar...
Hello, I have been trying to do a blast with my DEGs. The query sequence is 513kb in size but every time when I try it, I see the below...
Bumps [nanoid](https://github.com/ai/nanoid) from 3.3.7 to 3.3.8. Changelog Sourced from nanoid's changelog. 3.3.8 Fixed a way to break Nano ID by passing non-integer size (by @myndzi). Commits 3044cd5 Release 3.3.8 version...
![dependabot[bot] avatar](https://avatars.githubusercontent.com/in/29110?v=4 "dependabot[bot] avatar"){kind=avatar}
https://www.loom.com/share/6d87effb48bf470198504dd9dade8cd8?sid=70163c83-1873-43ae-bb6d-01661e38081e
When you print to PDF in Safari, it generally looks great. But some of the formatting gets broken: (WE need to downsize the font or wrap to next line earlier)
Hi, I have been trying to retrieve chardonnay CDS and protein sequences using a blast search and getting this error "System error Looks like there is a problem with the...
