cram topic
cram
cram is a computational room acoustics module to simulate and explore various acoustic properties of a modeled space
htslib
C library for high-throughput sequencing data formats
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
cljam
A DNA Sequence Alignment/Map (SAM) library for Clojure
VerifyBamID
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
Iliad
ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications
pheniqs
Fast and accurate sequence demultiplexing