single-cell-omics topic
List
single-cell-omics repositories
Pamona
19
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3
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The software of Pamona, a partial manifold alignment algorithm.
scyan
30
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1
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Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.
randomly
36
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15
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A Library for Denoising Single-Cell Data with Random Matrix Theory
Banksy
48
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11
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BANKSY: spatial clustering
MAGMA_Celltyping
67
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29
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Find causal cell-types underlying complex trait genetics
awesome-cell-cell-communication
21
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4
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Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics
CellScopes.jl
19
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2
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A Julia package for single cell and spatial data analysis