single-cell-omics topic

List single-cell-omics repositories

Pamona

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The software of Pamona, a partial manifold alignment algorithm.

scyan

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Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.

randomly

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A Library for Denoising Single-Cell Data with Random Matrix Theory

MAGMA_Celltyping

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Find causal cell-types underlying complex trait genetics

awesome-cell-cell-communication

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Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics

CellScopes.jl

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A Julia package for single cell and spatial data analysis