cytometry topic

A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces

whitews

A Python library for reading and writing Flow Cytometry Standard (FCS) files

whitews

A data-centric flow/mass cytometry automated analysis framework

burtonrj

Fast embedding ot multidimensional datasets, great for cytometry data

exaexa

Image Mass Cytometry analysis pipeline

nf-core

Huge-scale, high-performance flow cytometry clustering in Julia

LCSB-BioCore

Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.

MICS-Lab

An R package for analyzing high-dimensional cytometry data using the tidyverse.

keyes-timothy

Easily install and load packages from the tidyomcis ecosystem

tidyomics