sequence-similarity topic
List
sequence-similarity repositories
FAMSA
133
Stars
26
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Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
kmer-db
74
Stars
16
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Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).
vclust
46
Stars
1
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Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes