pseudotime topic

Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptom...

rezakj

Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).

alexisvdb

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

parashardhapola

a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.

LouisFaure

A deep learning architecture for robust inference and accurate prediction of cellular dynamics

LiQian-XC