nanopore topic

PEPPER-Margin-DeepVariant

kishwarshafin

Long read / genome alignment software

marbl

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

HKU-BAL

Identification of differential RNA modifications from nanopore direct RNA sequencing

GoekeLab

SquiggleKit: A toolkit for manipulating nanopore signal data

Psy-Fer

Assembly and binning of metagenomes

nf-core

Nanopore demultiplexing, QC and alignment pipeline

nf-core

Snakemake pipelines for nanopore sequencing data archiving and processing

giesselmann

Assembly and intrahost/low-frequency variant calling for viral samples

nf-core

Long Reads Annotation pipeline

lfaino