microbial-genomics topic
List
microbial-genomics repositories
bakta
404
Stars
43
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Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
PPanGGOLiN
215
Stars
23
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Build a partitioned pangenome graph from microbial genomes
FastANI
349
Stars
63
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Fast Whole-Genome Similarity (ANI) Estimation
nonpareil
40
Stars
11
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Estimate metagenomic coverage and sequence diversity
ANIclustermap
53
Stars
8
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A tool for drawing ANI clustermap between all-vs-all microbial genomes
MGCplotter
34
Stars
6
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Microbial Genome Circular plotting tool for comparative genomics using Circos
pyGenomeViz
237
Stars
19
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A genome visualization python package for comparative genomics
bac-genomics-scripts
42
Stars
33
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Collection of scripts for bacterial genomics
seeka
28
Stars
4
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Get microbial sequence data easier and faster