markov-state-model topic
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markov-state-model repositories
PyEMMA
304
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118
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🚂 Python API for Emma's Markov Model Algorithms 🚂
deeptime
709
Stars
77
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Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
msmtools
39
Stars
24
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Tools for estimating and analyzing Markov state models
apicultor
19
Stars
5
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[Deprecated] py2.7 API.Cultor: Another BigData approach to sound collections
enspara
33
Stars
15
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Modeling molecular ensembles with scalable data structures and parallel computing
AF-cryptic-pocket
21
Stars
2
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Cryptic pocket prediction using AlphaFold 2
MasterMSM
18
Stars
8
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Python package for generating Markov state models