metadynamics topic

List metadynamics repositories

crest

174
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CREST - A program for the automated exploration of low-energy molecular chemical space.

SML_CV

27
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5
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Using supervised machine learning to build collective variables for accelerated sampling

Enhanced_Sampling_Methods_Tutorials

34
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Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..

ufedmm

22
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8
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Unified Free Energy Dynamics (UFED) simulations with OpenMM

AF-cryptic-pocket

21
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2
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Cryptic pocket prediction using AlphaFold 2