biophysics topic

APBS - software for biomolecular electrostatics and solvation

Electrostatics

Analysis of non-covalent interactions in MD trajectories

maxscheurer

A Python platform for Structural Bioinformatics

graik

Software for biomolecular electrostatics and solvation calculations

Electrostatics

APBS & PDB2PQR - software for biomolecular electrostatics and solvation

Electrostatics

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Electrostatics

Modeling molecular ensembles with scalable data structures and parallel computing

bowman-lab

KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.

kamerlinlab

a Living ENsemble Simulator -- a lens to help you watch biophysics

flatironinstitute

Robust and stable clustering of molecular dynamics simulation trajectories.

moldyn