deconvolution topic

List deconvolution repositories

segmentation

100
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33
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Tensorflow implementation : U-net and FCN with global convolution

holy-edge

339
Stars
138
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Holistically-Nested Edge Detection

CaImAn

609
Stars
356
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Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

scaden

69
Stars
25
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Deep Learning based cell composition analysis with Scaden.

CNN-DICOM-Segmentation

92
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30
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DICOM Image Segmentation with CNNs in Tensorflow

pytorch-deconvnet

64
Stars
23
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Example of Deconvnet in PyTorch for VGG16

TED

60
Stars
10
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a fully Bayesian approach to deconvolve tumor microenvironment

ecotyper

160
Stars
39
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EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

Cascade

102
Stars
30
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Calibrated inference of spiking from calcium ΔF/F data using deep networks