gene-regulatory-network topic
pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regula...
SCope
Fast visualization tool for large-scale and high dimensional single-cell data
netZooR
netZooR is a network biology package implemented in R.
netZooPy
netZooPy is a network biology package implemented in Python.
adversarial-gene-expression
Adversarial generation of gene expression data using Generative Adversarial Networks
netbooks
Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..
netZooC
netZooC is a network biology package implemented in C.
netZooM
netZooM is a network biology package implemented in MATLAB.
dictys
Context specific and dynamic gene regulatory network reconstruction and analysis
normalisr
Causal inference, differential expression, and co-expression for scRNA-seq