dna topic

Official code repository for GATK versions 4 and up

broadinstitute

Python and C++ code for reading and writing genomics data.

google

16,432 Free Yara rules created by

SupportIntelligence

A Java API for high-throughput sequencing data (HTS) formats.

samtools

a python package for fast random access to sequences from plain and gzipped FASTA/Q files

lmdu

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

nextstrain

Efficient pythonic random access to fasta subsequences

mdshw5

3d engine implementation in DNA code!

pallada-92

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

RosettaCommons

tools for working with genome variation graphs

vgteam