cancer-variants topic

List cancer-variants repositories

awesome-cancer-variant-databases

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A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

pcgr

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Personal Cancer Genome Reporter (PCGR)

lollipops

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Lollipop-style mutation diagrams for annotating genetic variations.

IMPACT-Pipeline

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Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

deTiN

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DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated matched control.