bioinformatics-algorithms topic

Comparison of methods for trajectory inference on single-cell data 🥇

dynverse

Cluster single cells and analyze cell clade relationships with colorful visualizations.

GregorySchwartz

A collection of 50+ trajectory inference methods within a common interface 📥📤

dynverse

Predicting regulatory DNA elements based on epigenomic signatures

yupenghe

Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data

imgag

memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

muellan

L1000 peak deconvolution based on Bayesian analysis

njpipeorgan

Bystro genetic analysis (annotation, filtering, statistics)

bystrogenomics

Fast and simple algorithms for computing both LCSk and LCSk+

google

Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks

BaranziniLab