Joyjit Daw
Joyjit Daw
If you're open to it, we'd love to test both :). The adapters and a few reads in a pod5 would be awesome.
Yes perfect - I can be reached at joyjit dot daw at nanoporetech dot com . Thanks @obegik !
Hi @nglaszik - can you post what command you're running? Are you able to check your GPU utilization (using `nvidia-smi` or `nvtop` when the run is stuck at 99%? Is...
Hi @nglaszik - this is an odd situation and I don't have any obvious solution yet. It feels like it could be related to a specific offending read(s)... One suggestion...
thanks for reporting @pre-mRNA - why is the size of your combined dataset?
Hi @billytcl - thanks for raising this request! yes we have plans to add this in a future release
Hi all - I believe this is now available in dorado v0.7.1. you can set `splice` as the preset and pass in a junction bed file
Hi @pbpearman - are you able to use one of the prebuilt binaries? that would be the recommended way. Can you also share what cuda toolkit and Nvidia driver version...
Hi @pbpearman you can find prebuilt binaries here - https://github.com/nanoporetech/dorado?tab=readme-ov-file#installation
> I then copied that binary into the bin/ where the version I compiled was. I ran ctest --test-dir cmake-build with the pre-built binary This won't use any dependencies from...