Joyjit Daw
Joyjit Daw
> the file size of my individual channels do not seem to be changing. Does the duplex function automatically do adapter/primer trimming or is this not expected behavior? Are you...
No problem! > trimmed bams are human readable while my untrimmed are in binary? I never bothered to even try opening the bams before so not sure if that is...
@davidebolo1993 This is a super useful analysis, and some of it is certainly not expected. A simplex read _can_ end up in multiple duplex reads, but it should be a...
Hi @davidebolo1993 - unfortunately not yet, but I'm starting to look into this now. Sorry for the delay!
This will take a bit more time @davidebolo1993 , but hopefully we'll have some fixes in place for the next major release.
Hi @patbohn - thanks for flagging this! Yes this is indeed a lot of false positive splits. We will look into this right away.
Hi @ChristopherAdelmann Yes this discrepancy is currently expected, especially if the tail length is long. This is because the basecaller currently has difficulty calling long homopolymers. However the tail estimation...
Which version of dorado are you using? How large is your input? It's possible dorado is collecting some metadata from the pod5s first and that's taking a while. Is your...
Setup looks good to me. I did a digging online about the `jemalloc: Unsupported page size` issue and there are some reports for incompatibility with aarch64 processors. Not sure if...
> Dear author > I would like to ask you, is it possible to add a version for aarch64 architecture system page size (64K) in a dorado binary and source...