PyHealth
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A Deep Learning Python Toolkit for Healthcare Applications.
**Students**: Soumya Mazumder (soumyam4), Salazar, Andrew (aas15), Lin, Sharon (xinyiyl2) **Paper Title**: WatchSleepNet: A Novel Model and Pretraining Approach for Advancing Sleep Staging with Smartwatches **Paper Link**: # Overview This...
### 1. UIUC NetIDs - Andrew Salazar (aas15) - Sharon Lin (xinyiyl2) - Soumya Mazumder (soumyam4) ### 2. Contribution Type Task ### 3. High-Level Description This PR adds a new...
Add MIMIC-SBDH and MIMIC-III dataset classes and BioClinicalBERTAlcoholUse model - Implement MIMICSBDHDataset for SBDH annotations - Add MIMICIIIDataset for MIMIC-III integration - Introduce BioClinicalBERTAlcoholUse model for alcohol use classification -...
UIUC ID: ruokunn2 The LabTOP model was introduce in https://github.com/sunlabuiuc/PyHealth/pull/633. This PR contains a simple example for how to use the LabTOP model
Who I am: Mohsin Shah (NetID: mohsins2) Contribution type: New example / use case of PyHealth. High-level description: This PR adds an example script examples/eicu_llm_synthetic_mortality.py which demonstrates how to use...
### **Author** Huiyin Zheng - huiyinz2 ([email protected]) ### **Usage** ``` from pyhealth.datasets.iafib import iAFibDataset # Initialize the dataset root = "~/pyhealth-test" # Make it the location where you want the...
# Add TPC Model for Length of Stay Prediction ## Overview This PR implements **Temporal Pointwise Convolutional Networks (TPC)** for healthcare time series prediction, specifically designed for length of stay...
Hi, I was working on the VAE bounty. That bounty is based on the COVID-19 dataset. While looking at it, I wondered how users could customize the dataset, to use...
This notebook demonstrates how to build a multimodal deep learning model for in-hospital mortality prediction by combining: - **MIMIC-IV** electronic health record (EHR) time-series data - **MIMIC-CXR** chest X-ray images
…oded, will need to test and refine extensively for actual release This pull request introduces a comprehensive streaming mode for large-scale EHR datasets, significantly reducing memory usage by loading patient...