PyHealth

PyHealth copied to clipboard

**Contributor:** Charan Williams ([email protected]) **Contribution Type:** New Model **Description:** Added a new clinical summarization model, **BHCToAVS**, which converts Brief Hospital Course (BHC) notes into patient-friendly After-Visit Summaries (AVS). The model...

charanw

Bilal Arif netID: barif Contribution Type: Updated model Description: - Updated to current BaseModel/EmbeddingModel API - Implemented dilated causal convolutions for temporal sequence modeling on EHR data - Supports both...

bilalarif3197

[Bounty] Deepr PyHealth 2.0 ver.

1

## Contributor Information - **Name:** Joshua Steier - **Contribution Type:** Model ## Description Updated the Deepr model to align with PyHealth 2.0 conventions: - Migrated from `BaseEHRDataset` to `SampleDataset` -...

joshuasteier

**Contributor**: Yongda Fan ([email protected]), John Wu ([email protected]) **Contribution Type**: Dataset **Description** Memory effieicient implementation of BaseDataset and SampleDataset. It reducets the memory usage for MIMIC4 from 270GB down to 32GB...

Logiquo

PR for MedLink bounty Tests: To run the MedLink unit tests, from the project root run: pytest tests/core/test_medlink.py (locally, 3 passed & 1 warning) Model Implementation: - Implemented the MedLink...

Rian354

Raymond Mumme project contribution ([email protected])

rmumme2

Authors: Maxwell Bao (mbao6) Type of Contribution: New Task Description: This code allows for intake of Chest XRay jpgs, Report txts, and a metadata.csv from MIMIC-CXR(-JPG), processes data, and evaluates...

maxb420

In this PR we are including 3 new files that aim to add a new dataset and a task to go along with that dataset. This dataset is Heart_Disease_UCI.csv. It...

runalih

**Contributor:** Meredith McClain (mmcclan2) **NetID:** mmcclan2 **Type:** Model Implementation ## Description Implementation of wav2sleep, a unified multi-modal approach to sleep stage classification from physiological signals (ECG, PPG, abdominal and thoracic...

merebear9

This example shows how to use PyHealth with a custom text dataset to reproduce the *sentence-level* part of a radiology anomaly detection pipeline inspired by: Kim et al., "Integrating ChatGPT...

mc160uiuc