PyHealth
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A Deep Learning Python Toolkit for Healthcare Applications.
## Contributor - **Name:** Joshua Steier ## Contribution Type Model ## Description Implements the Dr. Agent model from "Dr. Agent: Clinical predictive model via mimicked second opinions" (JAMIA 2020). **Key...
## Changes - Adds YAML configuration files for derived datasets for vasopressor and ventilation durations for MIMIC-III and MIMIC-IV. - Adds associated vaso / vent duration tasks drawn from "[Racial...
### Background ANNPTSummDataset packages [PhysioNet’s Medical Expert Annotations of Unsupported Facts in Doctor-Written and LLM-Generated Patient Summaries](https://physionet.org/content/ann-pt-summ/1.0.1/) (MIMIC-IV discharge contexts, summaries, and hallucination annotations) so PyHealth users can study unsupported...
**Contributors:** Rohit Rao - rohit8 **Type:** Unique Contribution (Preprocessing Pipeline / Reproduction Example) **Description:** This PR introduces a complete **preprocessing pipeline** for the **TUH EEG Seizure Corpus (v2.0.3)**. It serves...
Daniel Kwan (NetID: dwkwan2) This PR implements the following changes: 1. Preliminary support for the Mamba model, loosely based on reproduction of EHRMamba (https://arxiv.org/abs/2405.14567). Depends on the pure PyTorch mamba.py...
**Who I am** - Gabriel Warner (gsw3), UIUC DL4H student **Contribution type** - Example notebook for a clinical NLP task **Summary** This PR adds a simple, runnable example demonstrating sentence-level...
Name: Erwan Caron NetID: ecaron2 Reproducing Paper Title: HIST-AID: Leveraging Historical Patient Reports for Enhanced Multi-Modal Automatic Diagnosis Contribution Type: Dataset, Task, and Tests I created a dataset to support...
**Contributors**: Vineetha Gurrala, vgurr4 Clay Douglas, ckd6 **Type**: Dataset Contribution **Description**: This PR introduces SOZStimulationDataset, a PyTorch-compatible dataset class for single-pulse electrical stimulation (SPES) EEG recordings used for seizure onset...
## Contributor Info * Name:Chengcen Zhou * Email: [email protected] ## Type of Contribution * New dataset (OhioT1DM: Ohio Type 1 Diabetes Mellitus) * New tasks (blood glucose prediction, hypoglycemia detection,...
## Contributor Info * Name: Chenngcen Zhou * Email: [email protected] ## Type of Contribution * New dataset (WESAD: Wearable Stress and Affect Detection) * New tasks (stress_detection_wesad_fn, binary and multiclass...