sirius

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Sirius only partially imports MS2 spectra from mzML/mzXML files

8

Hi SIRIUS team, I tried importing mzML/mzXML files containing MS1/MS2 information into Sirius (4.9.3), but only a small part of the precursors with their respective MS2 information show up in...

expoexplore

Mistakes in fragmentation tree and output spectra labels

9

Hi, There is a possible bug in the output format of the fragmentation tables of the Sirius output (the parent MF, C42H42O19 is correct): As fragments and heavier isotopic peaks...

nirshahaf

Formula decomposition of higher masses

3

Sirius team, Apart from the blocking issues which seem (independently) be due to connection problems with the CSI server, I have a very slow convergence of the algorithm when running...

nirshahaf

API available to interface sirius from R?

9

Dear all, we're currently implementing and (trying to streamline) functionality for MS data analysis in R (the [Spectra](https://github.com/RforMassSpectrometry/Spectra) package is one example of that). On the to-do list are also...

jorainer