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SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

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When & How to merge multiple eV into one .mgf file? For me, After running in MZmine3, I'v got 10eV.mgf, 20eV.mgf, 40eV.mgf. But in SIRIUS which need a merged.mgf, and...

I am working on an C# WPF application and I want to start running the sirius.exe with the help of command line. I have .mgf file as input. I will...

Hi, I am using the Sirius decomp tool to predict molecular formulas, but I noticed the mass you are using for Iron is incorrect. There is a ~2 Da mass...

Good day, I recently tried using SIRIUS 5.8.6 for Linux (64-bit), and I noticed that for all the results, the `molecularFormula` and `precursorFormula` values were identical. Is this the expected...

Hi ! We've trying to develop a wrapper around Sirius CLI in Rust for [our project](https://github.com/earth-metabolome-initiative/emi-monorepo). My problem is that the tests work on some machines but not on others....

Hi, I have been trying (quite hard) to make Sirus use Gurobi as the iLP solver instead of the built-in CLP, but so far to no avail. Could you please...

Hi, all. I hope to know how to import raw data (or spectrum) into Sirius app. The MS data was acquired in agilent Q-TOF

Hi, seeing inconsistent login issues where the SIRIUS session stops recognizing the login session after about 40 small-mass jobs, the rest of them fail. We are also trying to submit...

Dear developers, This is not really a bug, but I was wondering if you could help me. I am using Sirius for molecular formuala prediction, and I want to be...

The tools developed by your team are of great help to metabolomics research. However, when using the canopus module, it shows that the network cannot be connected. How should this...