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QuPath - Bioimage analysis & digital pathology
Organizations who would like to use your tool might want to verify the binaries you distribute are not being tampered with in transet. One easy way to make that easy...
Calculate a negative distance to the inner surface of annotations rather than saving the distance from the detection to annotation as zero. As mentioned in several places on the forum,...
## Feature request **Is your feature request related to a problem? Please describe.** Currently, the only way to know when Run for project completes is by actively watching the progress...
Basically, add this as a built-in command: * https://github.com/qupath/qupath/issues/77#issuecomment-301234930 It isn't a beautiful way to create a manual TMA grid, but it should be better than nothing (or hunting for...
## Bug report **Describe the bug** QuPath v0.3.2 hangs when attempting to open certain images with Bio-Formats, outside of a project. The problem occurs when: * Bio-Formats is the reader...
## IMPORTANT! This section is **only** for bug reports, which **must** follow the template below. Please post any other questions to the official QuPath forum at https://forum.image.sc/tags/qupath If in doubt,...
Support for annotation descriptions is improved in #1004 The screenshots below show the current status. The purpose of this feature request is to discuss further enhancements, in particular: * Consolidating...
## Bug report **Describe the bug** When QuPath is first launched, a few key options are presented to the user - which are currently the memory settings, locale and whether...
Currently, RoiTools supports [union](https://github.com/qupath/qupath/blob/2e7042fc0c5913757a1f5ba481941fa9ba9f8275/qupath-core/src/main/java/qupath/lib/roi/RoiTools.java#L124) and [intersection](https://github.com/qupath/qupath/blob/2e7042fc0c5913757a1f5ba481941fa9ba9f8275/qupath-core/src/main/java/qupath/lib/roi/RoiTools.java#L148) methods directly but not subtraction. Subtraction has to be done using [combineROIs](https://github.com/qupath/qupath/blob/2e7042fc0c5913757a1f5ba481941fa9ba9f8275/qupath-core/src/main/java/qupath/lib/roi/RoiTools.java#L97) and CombineOp methods, while not difficult, is incoherent as union and intersection...
## Bug report **Describe the bug** QuPath's viewer doesn't (really) support ICC profiles. This makes the display colors inconsistent with that seen in other viewers, for some file formats. **To...