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Qiita - A multi-omics databasing effort
For metaG preps: - Prep file - Sample info file from prep - ko.biom - ec.biom - none.biom (per genome) - per-gene.biom - pathway.biom - Cell counts.biom For metaT: -...
In our today's consortium meeting, the question was raised if a user can store social IDs for their qiita profile, e.g. ORCID. If I look at the DB structure, qiita...
Updated test_util.py for ResourceAllocationPlotTests by connecting the tests to database.
Hi Qiita team, we just ran into the issue that our fresh Qiita instance did process a real world sized (~700 samples) 16S study. Since DB is fresh, no SEPP...
I created an analysis with a GG2 filtered table, and was surprised to see it described as a Greengenes 13_8 table. Is a user able to select artifacts that are...
I searched the help documents for how to use Greengenes2 in Qiita, and did not observe [documentation](https://qiita.ucsd.edu/static/doc/html/search.html?q=greengenes2&check_keywords=yes&area=default). It's currently not obvious what a user needs to do to use Greengenes2...
@wasade reported that he couldn't do a taxonomy summary in Qiita. After a quick review I think the problem is that the biom table doesn't have the taxonomies as metadata.
A user is having issues downloading a raw artifact because it's marked as having human data by has_human but it doesn't as it's 16S.