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figure out how to get taxonomies in the GG2 tables for analyses

Open antgonza opened this issue 10 months ago • 2 comments

@wasade reported that he couldn't do a taxonomy summary in Qiita. After a quick review I think the problem is that the biom table doesn't have the taxonomies as metadata.

antgonza avatar Apr 17 '24 13:04 antgonza

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On Wed, Apr 17, 2024 at 6:43 AM Antonio Gonzalez @.***> wrote:

@wasade https://github.com/wasade reported that he couldn't do a taxonomy summary in Qiita. After a quick review I think the problem is that the biom table doesn't have the taxonomies as metadata.

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ackermag avatar Apr 17 '24 14:04 ackermag

QIIME 2 doesn't use metadata within the table, would it be possible for Qiita to provide the FeatureData[Taxonomy] artifact for the samples?

wasade avatar Apr 17 '24 16:04 wasade