qiita
qiita copied to clipboard
Creating an analysis with GG2 tables
I created an analysis with a GG2 filtered table, and was surprised to see it described as a Greengenes 13_8 table.
Is a user able to select artifacts that are GG2 filtered for analysis?
The Merging Scheme is: "parent command | grand parent command" and for those artifacts:
- parent is filter features from the gg2 plugin
- grandparent is Deblur 2021.09 filtered against GG13.8 as you are using the reference-hit tables
Thus, is accurate. A way to "solve" this would be to rename the commands in GG2 to reflect that, like: "Filter features against GG2 reference".
Thanks! It should note the version of GG2 as well. Should this be upstream of the merging scheme though, and part of the artifact information?
That's right. Note that all the names are inherited from the original commands (in this case the GG2 Q2 plugin) so the changes need to happen there not in Qiita.
How does this differ conceptually from representing how the GG 13_8 database is described as used? Qiita defines and creates artifact information, right?
If this does not need to change in Qiita, do you know what needs to change and where?