Padraig Gleeson

@sanjayankur31 I've added a check at each pynml option to see if it's a LEMS or NML file, depending on what the option expects. If it gets the wrong one,...

Hi @Daasin. Thanks for pointing this out. This is hopefully fixed in the pull requests https://github.com/openworm/OpenWorm/pull/339 and #346. Unfortunatley I've no way to test this on Windows, so please pull...

Thanks for the update. It's all not very well tested on Windows unfortunately, simply because most of us work on Linux/Mac, but if you do have suggestions for improvments we're...

See comment in #52... install from source...

Thanks for your question @Helveg. These more physiological scenarios would certainly be supported by MDF down the line, but it's a bit of a way off before there would be...

The data here: https://github.com/openworm/muscle_model/tree/master/BoyleCohen2008/data seems like experimental data, but no info/notes associated with it. I'd suggest first making sure their data matches the output of their matlab scripts before looking...

Hi @prcastro, could you visualise the cells ok in non transparent mode? It might be an issue with the driver on your machine on that OS that some transparency feature...

Do have a look at the testing that's already being run with [OMV](https://github.com/OpenSourceBrain/osb-model-validation). This framework installs jNeuroML on Travis, and runs tests in .test.\* files. For example [.testA.omt](https://github.com/openworm/muscle_model/blob/master/NeuroML2/.testA.omt) runs LEMS_Figure2A.xml...

@souravsingh The scripts in the NeuroML2 folder are well tested at the moment with [OMV](https://github.com/OpenSourceBrain/osb-model-validation) tests and additional scripts being run in the .travis.yml file as part of the NON_OMV_TESTS....

Thanks for reporting this @Dartomic. To be honest I've seen something like this myself running long simulations. Thankfully I've had enough ram for the sims to finish but clearly it's...