pgaudet

SynGO term annotations - report

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GO:0140235 GO:0140233 GO:0140232 GO:0099564 GO:0140239 GO:0140238 GO:0140249 GO:0140247 GO:0140246 GO:0099546 GO:0098987 GO:0099576 GO:0099575 GO:0099574 GO:0150035 GO:0150036 GO:0140245 GO:0099578 GO:0140244 GO:0099577 GO:0140243 GO:0099547 GO:0140252 GO:0140251 GO:0140250 GO:0099083 GO:0098925 GO:0099183 GO:0099556 GO:0099553...

Review annotations to single step processes or regulation of molecular function with no annotations

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GO:0015013 heparan sulfate proteoglycan biosynthetic process, linkage to polypeptide GO:1903049 negative regulation of acetylcholine-gated cation channel activity GO:1905620 negative regulation of alpha-(1->3)-fucosyltransferase activity GO:0010362 negative regulation of anion channel activity...

GO:0051281 positive regulation of release of sequestered calcium ion into cytosol GO:0031587 positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity GO:0060316 positive regulation of ryanodine-sensitive calcium-release channel activity

GO:0009931 calcium-dependent protein serine/threonine kinase activity Annotations are here: https://docs.google.com/spreadsheets/d/1bWTBr-4UTJuzbJoG8BPfJLptGWG19YTEOw1JSbwjy1w/edit?gid=0#gid=0

Review annotations to GO:0099004 calmodulin dependent kinase signaling pathway

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Proposal for obsoletion: https://github.com/geneontology/go-ontology/issues/28158 GO:0099004 calmodulin dependent kinase signaling pathway Annotations are here: https://docs.google.com/spreadsheets/d/1rwKOsbM-n14xtySUcyJB8hQxTMc1SxKh4EVsTNmBhlI/edit?gid=0#gid=0

The proposal has been made to obsolete: GO:0052899 N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity GO:0052904 N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity GO:0052903 N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity GO:0052895 N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity GO:0052893 N1-acetylspermine:oxygen oxidoreductase...

Missing GeneDB identifier -> UniProt mapping

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Hi @Achchuthan GeneDB LmjF.18.0360.2 GPI8 GO:0003923 PMID:10749923 IDA and if you look at https://www.genedb.org/#/gene/LmjF.18.0360 is not mapped to any UniProt identifier. However the full identifier (LmjF.18.0360.2:mRNA) corresponds to the mRNA,...

Review annotations to GO:0008785 alkyl hydroperoxide reductase activity and GO:0009389 dimethyl sulfoxide reductase activity

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Dear all, The proposal has been made to obsolete GO:0008785 alkyl hydroperoxide reductase activity and GO:0009389 dimethyl sulfoxide reductase activity See https://github.com/geneontology/go-ontology/issues/28261

Review annotations for bulk obsoletion of catalytic terms with UM-BBD mapping only, and no annotations

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See https://github.com/geneontology/go-ontology/issues/28261 GO:0004028 | 3-chloroallyl aldehyde dehydrogenase activity GO:0009389 | dimethyl sulfoxide reductase activity GO:0018547 | nitroglycerin reductase activity GO:0008785 | alkyl hydroperoxide reductase activity GO:0018641 | 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity...

Review annotations to GO:0102202 soladodine glucosyltransferase activity, GO:0102203 brassicasterol glucosyltransferase activity, GO:0102205 cholesterol alpha-glucosyltransferase activityand

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GO:0102203 brassicasterol glucosyltransferase activity GO:0102205 cholesterol alpha-glucosyltransferase activity GO:0102202 soladodine glucosyltransferase activity