pgaudet
pgaudet
This issue is GPI2.0 merges columns 1 and 2, compared with GPI1.2, see https://github.com/geneontology/go-annotation/blob/master/specs/gpad-gpi-2-0.md so, as far I can tell, it seems this is a different format, we cannot use...
This is in progress, need to check with @colinlog if we want to create terms for each possible reader.
Nice recent review: https://pubmed.ncbi.nlm.nih.gov/31119370/
MGI @LiNiMGI ComplexProtal @sandraorchard PseudoCap @glwinsor Still need to review their annotations.
@LiNiMGI Do you want to have a look at the MGI annotations before we go ahead with the obsoletion?
SGD and TAIR will also be updated automatically.
Thanks @ValWood I checked the PAINT annotations, and we dont have that MF; however there is an IBA to [GO:0033698](https://www.ebi.ac.uk/QuickGO/term/GO:0033698) Rpd3L complex, which is a child of histone deacetylase complex,...
In this case it would be a question for @alexsign - do these get propagated in the GOA pipeline? At GO central TBH I am not sure what we do....
@alexsign says that interontology links would NOT come from TreeGrafter as the source, so my hypothesis was incorrect.