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Extract 3D contacts (.pairs) from sequencing alignments

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Warning when running with pysam 0.23.1 leading to non-zero exit code

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I encounter the following warning when running pairtools with pysam 0.23.1: ``` > conda create -n pairtools pairtools ... The following packages will be downloaded: package | build ---------------------------|----------------- biopython-1.85...

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Extract 3D contacts (.pairs) from sequencing alignments

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